Dataset details
| Technique | Spatial transcriptomics |
|---|---|
| Title | Spatially resolved transcriptomics enables dissection of genetic heterogeneity in stage III cutaneous malignant melanoma |
| PMID | 30154148 |
| Description | Spatial transcriptomics (ST) was adapted to melanoma lymph node biopsies and successfully sequenced the transcriptomes of over 2,200 tissue domains. |
| Source | lymph node metastases from four patients diagnosed with stage III melanoma |
| Species | human |
| No. genes | nearly 18,000 genes |
| No. cells | NA |
| Resolution | 100 um |
| Data normalization | Median ratio normalization |
| Data availability | Count matrixes for exploring genes / gene signatures of interest are available at www.spatialtranscriptomicsresearch.org |