a database for spatially resolved transcriptomes


Technique Tomo-seq
Title Tomo-seq identifies SOX9 as a key regulator of cardiac fibrosis during ischemic injury
PMID 28724751
Description Tomo-seq was used to obtain a genome-wide gene expression signature with high spatial resolution spanning from the infarcted area to the remote to identify new regulators of cardiac remodeling.
Source 2.5-mm-wide portions of cardiac mouse tissue spanning from the infarct toward the remote region of the left ventricular anterior wall
Species mouse
No. genes 10545 genes
No. cells NA
Resolution cellular
Data normalization Z-score normalization
Data availability Raw data can be found in the Supplemental Information.