a database for spatially resolved transcriptomes

Dataset details

Technique Tomo-seq
Title Spatially resolved genome-wide transcriptional profiling identifies BMP signaling as essential regulator of zebrafish cardiomyocyte regeneration
PMID 26748692
Description This study applied tomo-seq to the regenerating zebrafish heart and identified genes enriched in the injury area, border zone, and uninjured myocardium.
Source wildtype zebrafish (4-18 months old) hearts at 3 and 7 days post cryoinjury (dpi)
Species zebrafish
No. genes 18139 genes
No. cells NA
Resolution cellular
Data normalization Spike-in normalization
Data availability GSE74652

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