a database for spatially resolved transcriptomes

Dataset details

Technique Spatial transcriptomics
Title Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
PMID 27365449
Description By positioning histological sections on arrayed reverse transcription primers with unique positional barcodes, this study demonstrated high-quality RNA-sequencing data with maintained two-dimensional positional information from the mouse brain and human breast cancer.
Source adult C57BL/6 mouse (>2 months old) olfactory bulb, breast cancer biopsy
Species human and mouse
No. genes 19025 genes (mouse), 16385 genes (human)
No. cells NA
Resolution 100 um
Data normalization Median ratio normalization
Data availability Gene counts and scripts can be downloaded from www.spatialtranscriptomicsresearch.org.

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Gene/ENSEMBL ID:     Please input gene symbol: such as Kctd12 or ENSMUSG00000098557.
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