a database for spatially resolved transcriptomes

Dataset details

Technique LCM-seq
Title A gene expression atlas of early craniofacial development
PMID 24780627
Description Laser capture microdissection (LCM) was used to isolate cells from the principal critical micro-regions, whose development, differentiation and signaling interactions are responsible for the construction of the mammalian face.
Source embryos from CD1 outbred mice (Charles River) with the day of vaginal plug designated E0.5
Species mouse
No. genes 511 genes
No. cells NA
Resolution cellular
Data normalization FPKM
Data availability Data is available on the FaceBase.Org website and in GEO under superset GSE55967, which includes individual data series GSE55964, GSE55965, and GSE55966 for ST1.0 single cell samples, LCM microarray, and LCM RNA-seq samples, respectively.